Daniel Colin Morgan's Resume

Daniel Colin Morgan

Research Engineer focused on building products with extra attention to details

Hong Kong, HKSAR

About

As a Bioinformaticist turned Engineer, I have successfully taken multiple products from 0 to 1. I have over 10 years of experience in working with universities and companies all around the world. I lead and contribute to teams effectively, ensuring a team can do its best work. I work mostly with Python, CUDA/RAPIDS and Bash. Recently, I turned to building products that solve real-world problems.

Work Experience

Graphistry

2022 - 2024

Research Engineer

Contribute to development of AI agents utilizing LLMs, develop GPU-accelerated network analysis toolkit and libraries, and build graph-based analysis and machine learning pipelines, Technologies: RAPIDS, CUDF, CUML, Python, Docker, Kubernetes, AWS
  • earth

Harvard Medical School

2019 - 2021

Postdoctoral Research Fellow

Epigenetics analysis. Develop NetZoo, implement GPU speed increases, Technologies: Python, R, Bash
  • Boston, MA

Hong Kong Univeristy

2021 - 2022

Research Fellow

Research Lead for Metagenomics
  • Hong Kong, HKSAR

Education

Stockholm University

2015 - 2019
Doctoral Degree in Bioinformatics with thesis on control systems engineering of biological networks

Ohio State University

2012 - 2014
Masters of Science Degree in Bioinformatics with thesis in biological networks clique merger algorithm

Skills

  • Graph-Theory
  • Python
  • RAPIDS/CUDA
  • Machine Learning
  • Bioinformatics
  • singularity/docker
  • snakemake

Side projects

cu-cat

An end-to-end gpu feature encoder developed for Graphistry

  • feature-engineering
  • python
  • RAPIDS
  • CUML/CUDF
  • GPU
  • AI Agents/LLM

graphistry

Graph Vizualization built on GPUs

  • network science
  • python
  • RAPIDS
  • GPU

NetZoo

Message Passing Family of Algorithms for Inferring Biological Networks

  • python
  • R
  • Bash

Viral_Snake

Message Passing Family of Algorithms for Inferring Biological Networks

  • singularity
  • snakemake
  • bioinformatics
  • python
  • Bash

GeneSPIDER

Platform for synthetic biological data generation and network inference

  • MATLAB
  • R
  • python